This page has moved from: http:/www.stfc.ac.uk/KE/Events/proteinanalysis.aspx. Please update your bookmark - thank you.

New technologies for protein analysis

STFC KITE Club
New technologies for protein analysis

One Great George Street, London
Wednesday 10th December 2008

Introduction

The genomic revolution resulted in the generation of whole DNA sequences of many organisms - from simple viruses to humans. Although genomics promised to open up new avenues of research, including novel pharmaceuticals and gene therapies, it is clear that this was only the first step. Whilst genomics results in a sequence of DNA, proteomics is the functional analysis of the structures encoded by these sequences. Much progress has been made in the field of protein analysis over the past few years, although the area is expanding, with more work to be done.

This meeting sought to investigate the current limitations in the field of instrumentation and data processing for proteomics, introduce STFC technologies to the life science community and broker new research partnerships. The workshop was held in collaboration with the Sensors & Instrumentation KTN.

Morning presentations detailed the needs of the biological community from three perspectives. Rob Beynon of Liverpool University opened the session with a presentation, breaking the instrumentation needs of the community down into three categories - the separation of biomolecules, analytical systems and bioinformatics. The latter topic was then discussed in more detail by Sarah Hunter of the Cambridge-based European Bioinformatics Institute, covering: the storage and back up, data movement, the analysis and interpretation of data, and user-access of data. In the final talk, Martin Welch of Cambridge University gave his perception of the technology constraints his laboratory faces. The rest of the day was taken up with presentations of technologies; from the use of Bayes Theorem to predict tertiary protein structure, to the combination of CERN and ESA technologies to produce a new multi-channel detector for high content imaging.

The workshop was oversubscribed, with 55 people attending on the day.

Programme

Time
Programme
Speaker
10:00 - 10:30 Registration and coffee
10:30 - 10:40 Welcome and introduction to STFC Penny Woodman (PDF - 1035kB - link opens in a new window), STFC
10:40 - 10:50 The Sensors & Instrumentation KTN Robin Higgons (PDF - 3541kB - link opens in a new window), SIKTN
Needs of the Biological Community
10:50 - 11:10 Needs of the biological community Rob Beynon, University of Liverpool
11:10 - 11:30 Bioinformatics and the big data era Sarah Hunter (PDF - 5359kB - link opens in a new window), EBI
11:30 - 11:50 Small bugs, big problems; proteomic analysis of microbial systems Martin Welch (PDF - 6797kB - link opens in a new window), University of Cambridge
11:50 - 12:10 Coffee
Technologies for Knowledge Transfer
12:10 - 12:30 Prediction of protein folding Farhan Feroz (PDF - 2341kB - link opens in a new window), University of Cambridge
12:30 - 12:50 3D data capture for studying dynamical processes Alan Greenaway (PDF - 7428kB - link opens in a new window), Herriot Watt University
12:50 - 13:10 New digital image metrics as the basis for deepening protein analysis Sabine McNeill (PDF - 4825kB - link opens in a new window), 3D Metrics
13:10 - 14:10 Lunch and posters
14:10 - 14:25 Funding for collaborative projects Mark Littlewood (PDF - 796kB - link opens in a new window), STFC
Case studies
14:25 - 14:45 New detector based on microchannel plate Jon Lapington (PDF - 8412kB - link opens in a new window), University of Leicester
14:45 - 15:05 Opportunities at Diamond Light Source Gwyndaf Evans (PDF - 12418kB - link opens in a new window), Diamond Light Source
15:05 - 15:25 Bayesian modelling in Systems Biology Darren Wilkinson (PDF - 2602kB - link opens in a new window), University of Newcastle
15:25 - 15:45 Modelling of microtuble dynamics Bernard Piettespan (PDF - 841kB - link opens in a new window), University of Durham
15:45 - 16:30 Close, tea and networking
Page last updated: 08 December 2009 by Angela Pottinger